Author

Zheng Li

University of ArizonaORCID 0000-0002-2882-6600Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Zheng Li8 papers · Chinese Academy of Forestry

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Michael S. BarkeriD· 2 shared Brittany L. SutherlandiD· 1 shared Eldridge WiselyiD· 1 shared George P. TileyiD· 1 shared Hannah E. MarxiD· 1 shared Katrina M. DlugoschiD· 1 shared Michael T. W. McKibbeniD· 1 shared Stacy A. Jorgensen· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 16 mutual co-author links

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2 shared papersBioinformatics

Michael S. BarkerORCID

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2 papers

Recent·Most cited

SLEDGe: Inference of ancient whole genome duplications using machine learning

Brittany L. Sutherland, George P. Tiley, Zheng Li, Michael T. W. McKibben, Michael S. Barker

SLEDGe uses a machine learning classifier with a Ks plot simulator to detect ancient whole-genome duplication signatures in genomic data with high accuracy.

bioRxiv · Jan 17, 2024 · PreprintBioinformatics

Progress Towards Plant Community Transcriptomics: Pilot RNA-Seq Data from 24 Species of Vascular Plants at Harvard Forest

Hannah E. Marx, Stacy A. Jorgensen, Eldridge Wisely, Zheng Li, Katrina M. Dlugosch, Michael S. Barker

The paper presents RNA-seq data from 24 vascular plant species at Harvard Forest, assessing transcriptome quality and finding no significant difference in gene assembly between diploid and polyploid species.

bioRxiv · Mar 31, 2020 · PreprintGenomics