Author

Jamie Canderan

Indiana University BloomingtonORCID 0000-0002-3079-8856Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

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Research Focus:database / resource· 2 Organism:human· 2 Assay:metagenomics· 2 Assay:proteomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:graph neural network· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Yuzhen YeiD· 2 shared Haixu TangiD· 1 shared Moses H. StamboulianiD· 1 shared Ruoying YuaniD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

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2 shared papersBioinformatics

Yuzhen YeORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintNov 25, 2024

Leveraging the Human Panproteome to Enhance Peptide and Protein Identification in Proteomics and Metaproteomics

Jamie Canderan, Ruoying Yuan, Haixu Tang, Yuzhen Ye

This paper introduces a panproteome graph to enhance peptide and protein identification in proteomics and metaproteomics by leveraging the human pangenome.

DOI 10.1101/2024.11.25.625239

humanproteomics

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BioinformaticsPLoS Computational BiologyPeer-reviewedMar 18, 2022

Metaproteomics as a tool for studying the protein landscape of human-gut bacterial species

Moses H. Stamboulian, Jamie Canderan, Yuzhen Ye

The paper uses metaproteomics to analyze human gut microbiome data, identifying generalist and specialist bacterial species and recovering ORFs missed by gene predictors.

28 citations

humanmetagenomics

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