Author

Valeria Michelacci

Istituto Superiore di SanitàORCID 0000-0002-3147-7974Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Assay:whole-genome sequencing· 2 Organism:E. coli· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Arnold KnijniD· 2 shared Stefano MorabitoiD· 2 shared Aldert ZomeriD· 1 shared Ana AmaroiD· 1 shared Ângela PistaiD· 1 shared Angela van Hoek· 1 shared Brian Byrne· 1 shared Camilla SekseiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Arnold KnijnORCID

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2 papers

Recent·Most cited

Population analysis and host-disease associations of Shiga toxin-producing Escherichia coli from various sources across eleven European countries using whole genome sequencing

Rosangela Tozzoli, Tristan Schadron, Arnold Knijn, Luca De Sabato, Stefano Morabito, Margherita Montalbano Di Filippo, Eve Zeyl Fiskebeck, Gro Skøien Johannessen, Jeevan Karloss Antony Samy, Linnea Good, Robert Söderlund, Angela van Hoek, Lapo Mughini‐Gras, Eelco Franz, Kinga Wieczorek, , Camilla Sekse

This paper analyzes STEC population structure and host-disease associations using whole genome sequencing of 3,418 isolates from 11 European countries, identifying distinct subpopulations linked to disease severity.

bioRxiv · Apr 28, 2026 · PreprintGenomics

Advanced Research Infrastructure for Experimentation in genomicS (ARIES): a lustrum of Galaxy experience

Arnold Knijn, Valeria Michelacci, Massimiliano Orsini, Stefano Morabito

The paper describes the development and growth of the ARIES platform over five years as a Galaxy-based system for genomic and epidemiological data analysis in molecular epidemiology.

bioRxiv · May 14, 2020 · PreprintBioinformatics