TEMPTED: Time-Informed Dimensionality Reduction for Longitudinal Microbiome Studies
Pixu Shi, Cameron Martino, Rungang Han, Stefan Janssen, Gregory A. Buck, Myrna G. Serrano, Kouros Owzar, Rob D. Knight, Liat Shenhav, Anru R. Zhang
TEMPTED improves analysis of longitudinal microbiome data by incorporating time as a continuous variable, achieving high accuracy in phenotype classification and identifying microbial markers linked to birth outcomes.
Genome biology · Dec 18, 2024Peer-reviewedBioinformatics