Molin Yue

eQTM (expression quantitative trait methylation) Atlas: a comprehensive resource of over 11 million DNA methylation-gene expression associations through across 11 tissues and 4 diseases

eQTM Atlas, an R Shiny resource, curates over 11 million DNA methylation-gene expression associations from eight cohorts and 11 tissues to annotate EWAS CpGs beyond proximity.

Molecular Group and Correlation Guided Structural Learning for Multi-Phenotype Prediction

The paper introduces a supervised learning algorithm for multi-phenotype genomic prediction, showing improved performance in gene expression and DNA methylation analysis and cell type deconvolution.

Methyl-TWAS: A powerful method for in silico transcriptome-wide association studies (TWAS) using long-range DNA methylation

Methyl-TWAS improves gene expression imputation and TWAS by using long-range DNA methylation markers, outperforming existing methods in nasal epithelium and white blood cells.

Robust and Accurate Doublet Detection of Single-Cell Sequencing Data via Maximizing Area Under Precision-Recall Curve

This paper introduces RADO, a doublet detection algorithm for single-cell sequencing data that maximizes the area under the precision-recall curve, outperforming existing methods on multiple datasets.