Author

Xidong Wu

University of PittsburghORCID 0000-0001-8796-4272Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:large language model· 1 Assay:proteomics· 1

Frequent Co-Authors

Arun DasiD· 1 shared Dexter R. PrattiD· 1 shared Haoran HuiD· 1 shared Heng HuangiD· 1 shared Jianqiu ZhangiD· 1 shared Ke NiiD· 1 shared Molin YueiD· 1 shared Parth S. PateliD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Arun DasORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJan 27, 2024

reguloGPT: Harnessing GPT for Knowledge Graph Construction of Molecular Regulatory Pathways

Xidong Wu, Yiming Zeng, Arun Das…·Yufei Huang

reguloGPT constructs a knowledge graph of molecular regulatory pathways using GPT-4 for entity recognition and relationship extraction, improving over existing methods and demonstrating utility in cancer research.

11 citations

proteomicslarge language model

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BioinformaticsbioRxivPreprintOct 30, 2023

Robust and Accurate Doublet Detection of Single-Cell Sequencing Data via Maximizing Area Under Precision-Recall Curve

Yanshuo Chen, Xidong Wu, Ke Ni…·Heng Huang

This paper introduces RADO, a doublet detection algorithm for single-cell sequencing data that maximizes the area under the precision-recall curve, outperforming existing methods on multiple datasets.

1 citation

scRNA-seqscATAC-seq

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