Author

Deniz Doğan

ORCID 0000-0002-3427-3205Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:experimental assay· 1 Assay:protein structure· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Elena PapaleoiD· 1 shared Joshua B. RubiniD· 1 shared Ludovica BeltrameiD· 1 shared Matteo TibertiiD· 1 shared Shahriyar Mahdi RobbaniiD· 1 shared Valentina SoraiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Elena PapaleoORCID

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1 paper

Recent·Most cited

PyInteraph2 and PyInKnife2 to analyze networks in protein structural ensembles

Valentina Sora, Matteo Tiberti, Ludovica Beltrame, Deniz Doğan, Shahriyar Mahdi Robbani, Joshua B. Rubin, Elena Papaleo

The paper introduces two open-source tools for analyzing protein structural ensembles using network theory, focusing on reproducibility and parameter stability.

Journal of Chemical Information and Modeling · Jul 12, 2023Peer-reviewedBioinformatics