Author

Jinoos Yazdany

University of California, San FranciscoORCID 0000-0002-3508-4094Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Immunology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 4 Organism:human· 4 Assay:bulk RNA-seq· 3 Approach:machine learning (classical)· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Assay:proteomics· 1

Frequent Co-Authors

Chun YeiD· 4 shared Maria Dall’EraiD· 4 shared Cristina M. LanataiD· 3 shared Lindsey A. CriswelliD· 3 shared Marina SirotaiD· 3 shared Charles LangelieriD· 2 shared Kimberly E. TayloriD· 2 shared Lenka MaliskovaiD· 2 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersBioinformatics

Chun YeORCID

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Author profile →

4 papers

Recent·Most cited

ImmunologybioRxivPreprintOct 4, 2026

Longitudinal linear-epitope profiling of SLE identifies novel antigens associated with disease and disease activity

Charlotte Hurabielle, Yutong V Wang, Bryan Castillo-Rojas…·Joseph L. DeRisi

This study identifies novel SLE autoantigens and links EBV-driven immunity to autoimmunity through longitudinal PhIP-seq and machine learning analysis.

DOI 10.64898/2026.09.29.755420

humanproteomics

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BioinformaticsbioRxivPreprintApr 27, 2025

Transcriptomic analysis reveals immune signatures associated with specific cutaneous manifestations of lupus in systemic lupus erythematosus

Ernest Y. Lee, Sarah Patterson, Zachary Cutts…·Marina Sirota

The paper identifies immune signatures in SLE cutaneous subtypes using transcriptomics, revealing subtype-specific pathways and potential therapeutic targets.

DOI 10.1101/2025.04.27.649460

humanbulk RNA-seq

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Molecular BiologybioRxivPreprintNov 27, 2023

Cell-Specific Transposable Element Gene Expression Analysis Identifies Associations with Systemic Lupus Erythematosus Phenotypes

Zachary Cutts, Sarah L. Patterson, Lenka Maliskova…·Cristina M. Lanata

The paper identifies cell-specific transposable element (TE) gene expression associations with SLE phenotypes, finding 731 differentially expressed TEs linked to antiviral pathways and IFN signaling.

DOI 10.1101/2023.11.27.567477

humanbulk RNA-seq

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BioinformaticsbioRxivPreprintOct 30, 2020

Ethnicity-specific transcriptomic variation in immune cells and correlation with disease activity in systemic lupus erythematosus

Gaia Andreoletti, Cristina M. Lanata, Ishan Paranjpe…·Marina Sirota

This study identifies ethnicity-specific transcriptomic subgroups in SLE patients using RNA-seq data and correlates them with disease activity.

DOI 10.1101/2020.10.30.362715

humanbulk RNA-seq

𝕏 PostBluesky