Author

Kübra Narcı

Seven Bridges Genomics (United States)ORCID 0000-0002-3532-2152Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Organism:human· 1 Assay:long-read sequencing· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexey Dolgoborodov· 2 shared Amit JainiD· 2 shared Deniz TurgutiD· 2 shared Duygu Kabakci-ZorluiD· 2 shared Elif ArslaniD· 2 shared Güngör BudakiD· 2 shared Huseyin Serhat TetikoliD· 2 shared Özem Kalay· 2 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Alexey Dolgoborodov

Mutual co-authors in cluster

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2 papers

Recent·Most cited

precisionFDA Truth Challenge V2: Calling variants from short- and long-reads in difficult-to-map regions

Nathan D. Olson, Justin Wagner, Jennifer McDaniel, Sarah H. Stephens, Samuel T. Westreich, Anish G. Prasanna, Elaine Johanson, Emily S. Boja, Ezekiel J. Maier, Omar Serang, David Jáspez, Jose Miguel Lorenzo-Salazar, Adrián Muñoz‐Barrera, Luis A. Rubio‐Rodríguez, Carlos Flores, , Justin M. Zook

The paper evaluates variant calling in difficult genomic regions using short- and long-read sequencing, showing improved performance with new methods and multi-technology approaches.

Cell Genomics · Apr 27, 2022Peer-reviewedBioinformatics

Population-specific genome graphs improve high-throughput sequencing data analysis: A case study on the Pan-African genome

Huseyin Serhat Tetikol, Kübra Narcı, Deniz Turgut, Güngör Budak, Özem Kalay, Elif Arslan, Sinem Demirkaya-Budak, Alexey Dolgoborodov, Amit Jain, Duygu Kabakci-Zorlu, Richard Brown, Vladimir Semenyuk, Brandi N. Davis‐Dusenbery

This study develops population-specific genome graphs to improve sequencing data analysis, showing reduced mapping errors and better variant calling in African ancestry samples.

bioRxiv · Mar 19, 2021 · PreprintBioinformatics