C.La.P.: Enhancing transformer-based genomic signal modeling by integrating DNA sequences and chromatin accessibility data
Panos Firbas, Carolina de Souza Thimoteo Gonçalves, Gonzalo G. de Polavieja
The paper introduces CLaP, a transformer-based model that integrates DNA sequences and ATAC-seq data to improve chromatin modeling, achieving high accuracy in predicting genomic signals and detecting CTCF binding sites.
bioRxiv · Feb 19, 2025 · PreprintBioinformatics