Panos Firbas

The paper studies regulatory genome evolution in echinoderms, revealing deep conservation of cis-regulatory elements and chromatin organization, suggesting an ancestral regulatory pattern in animal genomes.

This paper reviews data science methods for longitudinal multi-omics in microbiome research, highlighting the need for integrated approaches and the lack of widely adopted methods.

The paper introduces CLaP, a transformer-based model that integrates DNA sequences and ATAC-seq data to improve chromatin modeling, achieving high accuracy in predicting genomic signals and detecting CTCF binding sites.

The paper identifies cis-regulatory elements in the zebrafish and human pancreas, revealing disease-related enhancers that affect gene expression and contribute to pancreatic disorders.

The paper maps histone modifications across thirteen human tissues during organogenesis to understand gene regulation and link noncoding mutations to developmental disorders.