Author

Piotr Tynecki

Bialystok University of TechnologyORCID 0000-0002-3581-3306Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1

Frequent Co-Authors

Agnieszka OniśkoiD· 1 shared Aleksandra WilczakiD· 1 shared Andrzej KoniecznyiD· 1 shared Arkadiusz GuzińskiiD· 1 shared Daniel C NelsoniD· 1 shared Izabela RybickaiD· 1 shared Jarosław DastychiD· 1 shared Joanna KazimierczakiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Agnieszka OniśkoORCID

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2 papers

Recent·Most cited

A synthetic phageome reveals widespread and diverse human antibody responses to bacteriophages

Katarzyna Gembara, Marek Adam Harhala, Paulina Miernikiewicz, Zuzanna Maria Kaźmierczak, Paul L. Bollyky, Andrzej Konieczny, Aleksandra Wilczak, Izabela Rybicka, Piotr Tynecki, Miroslawa Rozycka, Natalia Jędruchniewicz, Marlena Kłak, Daniel C Nelson, Wojciech Witkiewicz, Krystyna Dąbrowska

The paper develops PhageScan to study human antibody responses to bacteriophages, finding widespread IgG reactivity and identifying immunogenic epitopes.

bioRxiv · Nov 1, 2026 · PreprintImmunology

PhageAI - Bacteriophage Life Cycle Recognition with Machine Learning and Natural Language Processing

Piotr Tynecki, Arkadiusz Guziński, Joanna Kazimierczak, Michał Jadczuk, Jarosław Dastych, Agnieszka Oniśko

A linear SVM on Word2Vec 6-mer embeddings of phage nucleotide sequences calls phages virulent or temperate with 98.90% cross-validated accuracy, needing no ORF annotation.

bioRxiv · Jul 11, 2020 · PreprintBioinformatics✦ In-depth digest