Improved Graph-based Antibody-aware Epitope Prediction with Protein Language Model-based Embeddings
Mansoor Ahmed, Sarwan Ali, Avais Jan, Imdadullah Khan, Murray Patterson
This paper improves epitope prediction using graph convolutional networks and protein language model embeddings, achieving an AUCROC of 0.65 on a benchmark dataset.
Lecture notes in computer science · Oct 31, 2025Peer-reviewedBioinformatics