Author

Imdadullah Khan

Lahore University of Management SciencesORCID 0000-0002-6955-6168Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Approach:matrix factorization· 1 Assay:protein sequence· 1 Assay:proteomics· 1

Frequent Co-Authors

Murray PattersoniD· 2 shared Sarwan AliiD· 2 shared Avais JaniD· 1 shared Mansoor AhmediD· 1 shared Usama SardariD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 8 mutual co-author links

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2 shared papersBioinformatics

Murray PattersonORCID

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2 papers

Recent·Most cited

BioinformaticsLecture notes in computer sciencePeer-reviewedOct 31, 2025

Improved Graph-based Antibody-aware Epitope Prediction with Protein Language Model-based Embeddings

Mansoor Ahmed, Sarwan Ali, Avais Jan…·Murray Patterson

This paper improves epitope prediction using graph convolutional networks and protein language model embeddings, achieving an AUCROC of 0.65 on a benchmark dataset.

DOI 10.1007/978-3-032-02489-3_22

protein sequencedeep learning

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BioinformaticsLecture notes in computer sciencePeer-reviewedJan 1, 2023

Efficient Sequence Embedding For SARS-CoV-2 Variants Classification

Sarwan Ali, Usama Sardar, Imdadullah Khan, Murray Patterson

This paper introduces an efficient sequence embedding method for SARS-CoV-2 variant classification, improving predictive performance and computational efficiency over existing kernel methods.

DOI 10.1007/978-981-99-7074-2_2

virusproteomics

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