Author

Flúvio Modolon

Universidade de São PauloORCID 0000-0002-3671-7869Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metagenomics· 4 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:benchmarking· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

Amanda Gonçalves BendiaiD· 3 shared Vivian H. PellizariiD· 3 shared Alessandro N. GarritanoiD· 2 shared Francielli Vilela PeresiD· 2 shared Alice de Moura EmilioiD· 1 shared Ana Carolina de Araújo ButarelliiD· 1 shared Augusto Miliorini AmendolaiD· 1 shared Célio Roberto JönckiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

Amanda Gonçalves BendiaORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

HiFiTaxa: a reproducible analysis pipeline for full length 16S rRNA gene and ITS amplicon sequencing from PacBio reads

Alessandro N. Garritano, Fluvio Modolon, Charles Robert Warren

HiFiTaxa is a Nextflow pipeline for analyzing PacBio HiFi reads of 16S rRNA and ITS amplicons, offering multiple classifiers and benchmarking their performance on mock communities and holdouts.

bioRxiv · Nov 4, 2026 · PreprintBioinformatics

A Machine Learning Approach Elucidates Spatial Patterns of Environmental Properties Driving Microbial Composition Over Santos Basin, South Atlantic

Júlio Cezar Fornazier Moreira, Flúvio Modolon, Natascha Menezes Bergo, Danilo Cândido Vieira, Gustavo Fonseca, Francielli Vilela Peres, Rebeca Graciela Matheus Lizarraga, Diana Carolina Duque Castaño, Alice de Moura Emilio, Augusto Miliorini Amendola, Renato Gamba Romano, Mateus G. Chuqui, Fabiana S. Paula, Daniel Leite Moreira, Célio Roberto Jönck, , Vivian H. Pellizari

This study uses machine learning to identify microbial assemblages in the Santos Basin, finding that environmental factors like temperature, salinity, and nutrients drive community structure across different depths.

FEMS Microbes · Jan 1, 2026Peer-reviewedMicrobiology

Genomic Insights into a Versatile Deep-Sea Methanotroph Constituting the Rare Biosphere of a Brazilian Carbonate Mound Complex

Ana Carolina de Araújo Butarelli, Fernanda Mancini Nakamura, Francielli Vilela Peres, Flúvio Modolon, Amanda Gonçalves Bendia, Raíssa Basti Ramos, Michel Michaelovitch de Mahiques, Paulo Yukio Gomes Sumida, Vivian H. Pellizari

The paper identifies a novel deep-sea methanotroph, Methylotuvimicrobium crucis, from a Brazilian carbonate mound, revealing its genomic adaptations for survival in oligotrophic environments.

mSystems · Dec 23, 2025Peer-reviewedMicrobiology

Promiscuous endosymbionts in deep-sea corals and crinoids are shaped by nitrogen cycling

Flúvio Modolon, Alessandro N Garritano, Lilian J Hill, Gustavo Duarte, Amanda Gonçalves Bendia, Rafael Bendayan de Moura, Vivian H. Pellizari, Torsten Thomas, Raquel Silva Peixoto

The paper identifies shared endosymbiotic microbes between deep-sea corals and crinoids that participate in nitrogen cycling, suggesting mutualistic interactions in nutrient-poor environments.

bioRxiv · Feb 25, 2025 · PreprintMicrobiology