Author

Petr Jurečka

Palacký University OlomoucORCID 0000-0002-3741-3672Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:DNA methylation· 2 Approach:statistical model· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:protein folding & dynamics· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Marie ZgarbováiD· 2 shared Eva MatouškováiD· 1 shared Filip LankašiD· 1 shared Ivan ČmeloiD· 1 shared Jiřı́ ŠponeriD· 1 shared Marek Cuker· 1 shared Pavlína Slavníková· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 16 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiophysics

Marie ZgarbováORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Sequence-dependent shape and stiffness of DNA and RNA double helices: hexanucleotide scale and beyond

Pavlína Slavníková, Marek Cuker, Eva Matoušková, Ivan Čmelo, Marie Zgarbová, Petr Jurečka, Filip Lankaš

This study presents mechanical properties of DNA and RNA duplexes based on molecular dynamics simulations and proposes a model to predict sequence-dependent shape and stiffness.

Journal of Chemical Information and Modeling · Aug 25, 2025Peer-reviewedBiophysics

Refinement of the Sugar Puckering Torsion Potential in the AMBER DNA Force Field

Marie Zgarbová, Jiřı́ Šponer, Petr Jurečka

This study refines the AMBER DNA force field parameters to better model A-DNA stability and improve protein-DNA complex modeling.

Journal of Chemical Theory and Computation · Jan 3, 2025Peer-reviewedBiophysics