Author

Yucong Liu

Shanghai UniversityORCID 0000-0002-3753-9670Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Research Focus:protein design· 1

Frequent Co-Authors

Dawei ZhuiD· 1 shared Jiayou Zhang· 1 shared Megh Manoj Bhalerao· 1 shared Sheng WangiD· 1 shared Shizhuo Zhang· 1 shared Yijun LiuiD· 1 shared Zhenhai LiiD· 1 shared Zhirui WangiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 16 mutual co-author links

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1 shared paperBioinformatics

Dawei ZhuORCID

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2 papers

Recent·Most cited

Protein-protein interaction prediction via structure-based deep learning

Yucong Liu, Yijun Liu, Zhenhai Li

This study introduces RSPPI, a deep learning framework for predicting protein-protein interactions using structural and sequence data, showing improved cross-species performance over existing methods.

Proteins Structure Function and Bioinformatics · Jun 23, 2024Peer-reviewedBioinformatics

GraphPrompt: Biomedical Entity Normalization Using Graph-based Prompt Templates

Jiayou Zhang, Zhirui Wang, Shizhuo Zhang, Megh Manoj Bhalerao, Yucong Liu, Dawei Zhu, Sheng Wang

This paper introduces GraphPrompt, a graph-based prompt learning method for biomedical entity normalization, improving performance on zero-shot and few-shot settings using a curated dataset of entity-synonym pairs.

bioRxiv · Nov 29, 2021 · PreprintBioinformatics