Author

Varuna Bamunusinghe

ORCID 0000-0002-3854-2724Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:fine-mapping· 1 Research Focus:GWAS / association mapping· 1

Frequent Co-Authors

Abdallah Amr MahmoudiD· 2 shared Adriano De MarinoiD· 2 shared Andrew TerpolovskyiD· 2 shared Biljana NovkovićiD· 2 shared Karatuğ Ozan BircaniD· 2 shared Puya G. YazdiiD· 2 shared Sandra BohniD· 2 shared Umar Khan· 2 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Abdallah Amr MahmoudORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 11, 2023

Retracing Human Genetic Histories and Natural Selection Using Precise Local Ancestry Inference

Jon Lerga-Jaso, Biljana Novković, Deepu Unnikrishnan…·Puya G. Yazdi

Orchestra improves local ancestry inference, revealing admixture patterns in Latin Americans, Ashkenazi Jews, and selection signals in British populations.

1 citation

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsPLoS ONEPeer-reviewedOct 19, 2022

A comparative analysis of current phasing and imputation software

Adriano De Marino, Abdallah Amr Mahmoud, Madhuchanda Bose…·Puya G. Yazdi

This study benchmarks phasing and imputation software using three datasets, finding Beagle 5.2 most accurate for common markers and IMPUTE5 for low-frequency markers, while also creating an automated pipeline for customized chip design.

46 citationstop 2%

whole-exome sequencingwhole-genome sequencing

𝕏 PostBluesky