Author

Kata Krizic

University of CopenhagenORCID 0000-0002-4065-4952Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Benedicte Schultz KapeliD· 1 shared Cecilia LövkvistiD· 1 shared Ingrid Ho Ching TsangiD· 1 shared Isidora Banjac· 1 shared Kim Bak JenseniD· 1 shared Laura Maarit PikkupeuraiD· 1 shared Malte ThodbergiD· 1 shared Marius Dioli· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Benedicte Schultz KapelORCID

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2 papers

Recent·Most cited

multiomeR: a pipeline for reproducible analysis of large-scale single-nucleus Epi Multiome datasets

Thomas Gade Koefoed, Shanshan He, Malte Thodberg, Laura Maarit Pikkupeura, Kata Krizic, Benedicte Schultz Kapel, Raquel Martínez, Simon Rasmussen, Torben F. Hansen

multiomeR provides a reproducible R pipeline for analyzing large-scale single-nucleus Epi Multiome datasets, improving efficiency and reducing memory usage compared to existing workflows.

bioRxiv · Oct 20, 2026 · PreprintBioinformatics

Design principles of small intestinal crypt maintenance

Isidora Banjac, Martti Maimets, Ingrid Ho Ching Tsang, Marius Dioli, Stine Lind Hansen, Kata Krizic, Raul Bardini Bressan, Cecilia Lövkvist, Kim Bak Jensen

The paper develops a spatially and temporally resolved model of small intestinal crypt maintenance using integrated approaches, revealing CBC cells as the main driver of tissue replenishment.

Developmental Cell · Jan 9, 2025Peer-reviewedCell Biology