Author

Daisuke B. Koyabu

Tokyo Medical and Dental UniversityORCID 0000-0002-4087-7742Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Chikara FurusawaiD· 1 shared Jun LiiD· 1 shared Masaki TakechiiD· 1 shared Masato TsutsumiiD· 1 shared Nen SaitoiD· 1 shared Rui Feng CaoiD· 1 shared Taro NojiriiD· 1 shared Toshiko FuruteraiD· 1 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 18 mutual co-author links

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1 shared paperBioinformatics

Chikara FurusawaORCID

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2 papers

Recent·Most cited

Temporal and regulatory dynamics of the inner ear transcriptome during development in mice

Rui Feng Cao, Masaki Takechi, Xiuwan Wang, Toshiko Furutera, Taro Nojiri, Daisuke B. Koyabu, Jun Li

This study identifies temporal gene expression patterns and regulatory pathways in mouse inner ear development using bulk RNA-Seq from E11.5 to P7.

Scientific Reports · Dec 7, 2022Peer-reviewedDevelopmental Biology

A method for morphological feature extraction based on variational auto-encoder : an application to mandible shape

Masato Tsutsumi, Nen Saito, Daisuke B. Koyabu, Chikara Furusawa

The paper introduces Morpho-VAE, a landmark-free method for shape analysis using variational autoencoders, applied to primate mandible images to extract morphological features for classification.

bioRxiv · May 18, 2022 · PreprintBioinformatics