Author

Merve Vural-Özdeniz

Bilkent UniversityORCID 0000-0002-4110-4928Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Özlen KonuiD· 2 shared Abdul Moiz AftabiD· 1 shared Ayşe Gökçe KeşküşiD· 1 shared Eren KumakiD· 1 shared Ertuğrul DalgıçiD· 1 shared Muazzez Çelebi-ÇınariD· 1 shared Said Tirkayi· 1 shared Thomas DardeiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 18 mutual co-author links

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2 shared papersBioinformatics

Özlen KonuORCID

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2 papers

Recent·Most cited

TP53-META, a meta-analysis tool for comparative transcriptomics of TP53 dependency: Examples from target silencing and liver fibrosis

Ayşe Gökçe Keşküş, Eren Kumak, Merve Vural-Özdeniz, Abdul Moiz Aftab, Said Tirkayi, Thomas Darde, Özlen Konu

TP53-META enables meta-analysis of TP53-related gene expression datasets to identify dependency patterns in transcriptomic changes across different conditions.

BMC Bioinformatics · Jun 11, 2026Peer-reviewedBioinformatics

Randomization based evaluation of distinct topological and cancer expression characteristics of mutually acting gene pairs

Ertuğrul Dalgıç, Muazzez Çelebi-Çınar, Merve Vural-Özdeniz, Özlen Konu

The paper evaluates mutual gene pair interactions in human molecular networks, finding distinct expression patterns and connectivity differences between normal and cancer tissues.

Integrative Biology · Jan 1, 2025Peer-reviewedSystems Biology