Author

Vassilios Ioannidis

SIB Swiss Institute of BioinformaticsORCID 0000-0002-4209-2578Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Research Focus:benchmarking· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexandros StamatakisiD· 1 shared Claus Stie KallesøeiD· 1 shared Dimitri HöhleriD· 1 shared Gesa WittiD· 1 shared Heinz Stockinger CiD· 1 shared Manfred KöhleriD· 1 shared Marie AttwoodiD· 1 shared Nick JutyiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Alexandros StamatakisORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 18, 2024

From spreadsheet lab data templates to knowledge graphs: A FAIR data journey in the domain of AMR research

Yojana Gadiya, Tooba Abbassi‐Daloii, Vassilios Ioannidis…·Gesa Witt

This paper describes a journey towards implementing FAIR data practices in antimicrobial resistance research, transitioning from spreadsheet-based data to a knowledge graph framework.

DOI 10.1101/2024.07.18.604030

database / resourcebenchmarking

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedDec 22, 2021

RAxML Grove: An empirical Phylogenetic Tree Database

Dimitri Höhler, Wayne Pfeiffer, Vassilios Ioannidis…·Alexandros Stamatakis

RAxML Grove provides a database of over 60,000 empirical phylogenetic trees and model parameters for simulating realistic data and analyzing tree shape distributions.

28 citations

statistical modeldatabase / resource

𝕏 PostBluesky