Author

Da Kuang

University of PennsylvaniaORCID 0000-0002-4310-2301Unclaimed ORCID profile · follow to get notified of new preprints

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Da Kuang1 paper · University of Pennsylvania

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:spatial domain detection· 2 Research Focus:batch correction / integration· 1 Approach:experimental assay· 1 Assay:scATAC-seq· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Junhyong KimiD· 2 shared Eric Mendoza· 1 shared Jean G. RosarioiD· 1 shared Jianqiao WangiD· 1 shared Jihoon KimiD· 1 shared Kernyu ParkiD· 1 shared Zhen MiaoiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 12 mutual co-author links

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2 shared papersBioinformatics

Junhyong KimORCID

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2 papers

Recent·Most cited

BioinformaticsNature CommunicationsPeer-reviewedJan 5, 2025

PACS allows comprehensive dissection of multiple factors governing chromatin accessibility from snATAC-seq data

Zhen Miao, Jianqiao Wang, Kernyu Park…·Junhyong Kim

PACS is a statistical model for analyzing snATAC-seq data that improves power and controls false positives in differential accessibility analysis.

7 citations

scATAC-seqstatistical model

𝕏 PostBluesky

NeurosciencebioRxivPreprintJul 18, 2024

Characterizing the Spatial Distribution of Dendritic RNA at Single Molecule Resolution

Jihoon Kim, Jean G. Rosario, Eric Mendoza…·Junhyong Kim

This study uses smFISH to characterize the spatial distribution of six dendritic mRNAs at sub-micrometer resolution, revealing gene-specific and morphology-dependent localization patterns and evidence of co-transport and clustering.

DOI 10.1101/2024.07.18.602927

spatial transcriptomicsexperimental assay

𝕏 PostBluesky