Author

Michael Rariden

Howard Hughes Medical InstituteORCID 0000-0002-4328-1004Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Assay:imaging· 1 Organism:multiple species· 1 Research Focus:software / tool· 1 Approach:transformer / foundation model· 1

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Carsen StringeriD· 1 shared Marius PachitariuiD· 1 shared

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2025-2025 · peak 1/yr

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1 shared paperBioinformatics

Carsen StringerORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintApr 28, 2025

✦ In-depth digest

Cellpose-SAM: superhuman generalization for cellular segmentation

Marius Pachitariu, Michael Rariden, Carsen Stringer

Cellpose's flow-field output on SAM's pretrained encoder yields one segmenter that errs less than a second human annotator on out-of-distribution images (0.163 vs 0.257 error rate).

257 citations

multiple speciesimaging

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