Author

Daniel Rigling

Swiss Federal Institute for Forest, Snow and Landscape ResearchORCID 0000-0002-4338-5364Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:fungi (other)· 3 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

György SiposiD· 3 shared Anna LipzeniD· 2 shared Balázs BálintiD· 2 shared Kerrie BarryiD· 2 shared Martin MünsterkötteriD· 2 shared Alexie PapanicolaouiD· 1 shared Andrea Patrigniani· 1 shared Arun N. Prasanna· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersGenomics

György SiposORCID

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3 papers

Recent·Most cited

Genomic innovation and horizontal gene transfer shaped plant colonization and biomass degradation strategies of a globally prevalent fungal pathogen

Neha Sahu, Boris Inđić, Johanna W.‐H. Wong‐Bajracharya, Zsolt Merényi, Huei‐Mien Ke, Steven R. Ahrendt, Tori-Lee Monk, Sándor Kocsubé́, Élodie Drula, Anna Lipzen, Balázs Bálint, Bernard Henrissat, Bill Andreopoulos, Francis M Martin, Christoffer Bugge Harder, , László G. Nagy

This study identifies horizontal gene transfer events in Armillaria fungi that contribute to plant biomass degradation and pathogenicity.

bioRxiv · Nov 10, 2022 · PreprintGenomics

Chromosomal assembly and analyses of genome-wide recombination rates in the forest pathogenic fungus Armillaria ostoyae

Renate Heinzelmann, Daniel Rigling, György Sipos, Martin Münsterkötter, Daniel Croll

The paper constructs a genetic map and assembles the genome of Armillaria ostoyae, identifying recombination hotspots and their association with gene content.

Heredity · Mar 13, 2020Peer-reviewedGenomics

Genome expansion and lineage-specific genetic innovations in the world’s largest organisms (Armillaria)

György Sipos, Arun N. Prasanna, Mathias C. Walther, Eoin O’Connor, Balázs Bálint, Krisztina Krizsán, Brigitta Kiss, Jaqueline Hess, Torda Varga, Jason Slot, Robert Riley, Bettina Bóka, Daniel Rigling, Kerrie Barry, Juna Lee, , László G Nagy

This study sequenced four Armillaria genomes and analyzed gene expression and proteomics to identify genetic innovations linked to their pathogenicity and rhizomorph development.

bioRxiv · Jul 20, 2017 · PreprintEvolutionary Biology