Author

Kimberley V. Sukhum

ORCID 0000-0002-4428-5381Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:metagenomics· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:statistical model· 1

Frequent Co-Authors

Cheryl Sew Hoy· 2 shared Hannah SturgeoniD· 2 shared Julian TrachseliD· 2 shared Ruben A. T. MarsiD· 2 shared David M. GoadiD· 1 shared Emeran A. MayeriD· 1 shared Pamela A. NietoiD· 1 shared Star Edwards· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 32 mutual co-author links

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2 shared papersMicrobiology

Cheryl Sew Hoy

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 29, 2026

Integrating stool chemistry measurements with metagenomics in adults reveals distinct gut health profiles

Timothy J. Straub, Pamela A. Nieto, Julian Trachsel…·Kimberley V. Sukhum

The paper integrates stool chemistry metrics with shotgun metagenomics in adults to identify distinct gut health profiles associated with microbial and inflammatory markers.

DOI 10.64898/2026.10.23.759375

humanmetagenomics

𝕏 PostBluesky

MicrobiologybioRxivPreprintAug 29, 2026

Robust taxonomic classification in gut and vaginal microbiomes demonstrated through benchmarking with age-specific synthetic communities

Julian Trachsel, Hannah Sturgeon, David M. Goad…·Kimberley V. Sukhum

The paper benchmarks metagenomic pipelines using age- and body site-specific synthetic communities, showing THMCv2 has higher recall and F1 scores while MetaPhlAn4 has higher precision.

DOI 10.64898/2026.07.06.736764

humanmetagenomics

𝕏 PostBluesky