Author

Yujing Ye

Xiamen UniversityORCID 0000-0002-4581-6789Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1

Frequent Co-Authors

Jiahui GuaniD· 1 shared Jijun Tang· 1 shared Junwen WangiD· 1 shared Lantian YaoiD· 1 shared Li WeiiD· 1 shared Peilin XieiD· 1 shared Tzong-Yi LeeiD· 1 shared Xiangrong LiuiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Jiahui GuanORCID

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1 paper

Recent·Most cited

Geometry-enhanced protein language modeling enables discovery of novel antibiotic resistance genes

Xingqiao Lin, Jiahui Guan, Yue Hong, Yilian Guo, Yutao Yang, Peilin Xie, Zhihao Zhao, Xingchen Liu, Yixian Huang, Yujing Ye, Yun Tang, Tzong-Yi Lee, Ying‐Chih Chiang, Li Wei, Xiangrong Liu, , Lantian Yao

GeoARG improves detection of distant antibiotic resistance genes using structural features and protein language models, uncovering 1,485 novel candidates.

bioRxiv · Apr 8, 2026 · PreprintBioinformatics