Xutong Wang

Deciphering the Sequence Basis and Application of Transcriptional Initiation Regulation in Plant Genomes Through Deep Learning

GenoRetriever uses deep learning to identify sequence motifs governing transcription start site selection in plant genomes, revealing how natural variation and lineage-specific effects influence promoter usage.

T2T Gap-free Genome Assembly of Gp03, a Soybean Cultivar with High Genetic Transformation Efficiency

The paper presents a complete T2T genome assembly of the soybean cultivar Gp03, which has high genetic transformation efficiency, providing a valuable resource for soybean breeding.

Widespread transcription initiation within coding sequences marks tissue identity and accessible chromatin

The paper identifies transcription start sites in soybean tissues, revealing widespread transcription initiation within coding sequences that are tissue-specific and epigenetically regulated.

Integration of eQTL and Machine Learning Methods to Dissect Causal Genes with Pleiotropic effects in Genetic Regulation Networks of Seed Cotton Yield

This study integrates eQTL analysis with machine learning to identify pleiotropic genes affecting seed cotton yield and improve genetic dissection of agricultural traits.