Wanjie Feng

GenoRetriever uses deep learning to identify sequence motifs governing transcription start site selection in plant genomes, revealing how natural variation and lineage-specific effects influence promoter usage.

The paper presents a complete T2T genome assembly of the soybean cultivar Gp03, which has high genetic transformation efficiency, providing a valuable resource for soybean breeding.

The paper integrates genomic and transcriptomic data from a soybean diversity panel to identify regulatory elements and genes involved in symbiotic nitrogen fixation, revealing key circadian clock genes and eQTLs.

The paper identifies transcription start sites in soybean tissues, revealing widespread transcription initiation within coding sequences that are tissue-specific and epigenetically regulated.