Author

M. Hassan Najafi

Case Western Reserve UniversityORCID 0000-0002-4655-6229Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:statistical model· 1 Organism:virus· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Daniel J BlankenbergiD· 1 shared Fabio CumboiD· 1 shared Kabir DhilloniD· 1 shared Sercan AygüniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Daniel J BlankenbergORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintSep 6, 2026

HyperSketch: de Bruijn graph sketching for genomic similarity estimation with Hyperdimensional Computing

Fabio Cumbo, Kabir Dhillon, M. Hassan Najafi…·Daniel J Blankenberg

HyperSketch provides a structure-aware genomic similarity method using de Bruijn graphs and Hyperdimensional Computing, achieving high-resolution strain clustering and deep evolutionary scaling.

DOI 10.64898/2026.09.01.748726

viruswhole-genome sequencing

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