Author

Sven Heins

University Medical Center Hamburg-EppendorfORCID 0000-0002-4696-672XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Research Focus:database / resource· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1

Frequent Co-Authors

Stefan BonniD· 3 shared Abdul Sattar· 1 shared Abhivyakti Gautam· 1 shared Anna-Maria LiebhoffiD· 1 shared Ashish RajputiD· 1 shared Behnam YousefiiD· 1 shared Brit MollenhaueriD· 1 shared Claudia TrenkwalderiD· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioinformatics

Stefan BonnORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioChemAIgent: An AI-driven Protein Modeling and Docking Framework for Structure-Based Drug Discovery

Behnam Yousefi, Nora Constanze Laubach, Sven Heins, Lucia Testa, Søren W. Gersting, Stefan Bonn

BioChemAIgent provides an AI-driven framework for protein modeling and docking in drug discovery, integrating multiple tools into a unified interface.

bioRxiv · Jan 22, 2026 · PreprintBioinformatics

Bias invariant RNA-seq metadata annotation

Hannes Wartmann, Sven Heins, Karin Kloiber, Stefan Bonn

This paper introduces a deep-learning based domain adaptation algorithm for RNA-seq metadata annotation, achieving higher accuracy than existing methods for tissue, sample source, and patient sex prediction.

bioRxiv · Nov 26, 2020 · PreprintBioinformatics

SEA: The Small RNA Expression Atlas

Raza‐Ur Rahman, Vikas Bansal, Maksims Fiošins, Anna-Maria Liebhoff, Ashish Rajput, Abdul Sattar, Daniel Sumner Magruder, Sumit Madan, Ting Sun, Abhivyakti Gautam, Sven Heins, Timur Liwinski, Jörn Bethune, Claudia Trenkwalder, Juliane Fluck, , Stefan Bonn

SEA provides a web tool for querying and analyzing small RNA expression across ten organisms, including differential expression and classification comparisons.

bioRxiv · Jul 2, 2019 · PreprintBioinformatics