Author

Tianhao Ni

National University of SingaporeORCID 0000-0002-5079-1029Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:clustering· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Guanao YaniD· 2 shared Bingjie LiiD· 1 shared Bingjie LiiD· 1 shared Guanxiong PeiiD· 1 shared Jingyi Jessica LiiD· 1 shared Kaixiu Jin· 1 shared Mannix J. BurnsiD· 1 shared Nan Xue· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBioinformatics

Guanao YanORCID

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2 papers

Recent·Most cited

CellScope: High-Performance Cell Atlas Workflow with Tree-Structured Representation

Bingjie Li, Runyu Lin, Tianhao Ni, Guanao Yan, Mannix J. Burns, Jingyi Jessica Li, Zhigang Yao

CellScope improves cell atlas construction by integrating UMAP with hierarchical clustering, enhancing clustering performance, visualization, and interpretability across single-cell datasets.

Nature Communications · Dec 30, 2025Peer-reviewedBioinformatics

Interpretable scRNA-seq Analysis with Intelligent Gene Selection

Tianhao Ni, Xinyu Zhang, Kaixiu Jin, Guanxiong Pei, Nan Xue, Guanao Yan, Taihao Li, Bingjie Li

AIGS improves scRNA-seq analysis by selecting informative genes and using a scale-invariant distance metric, achieving better clustering and visualization.

bioRxiv · Sep 1, 2024 · PreprintBioinformatics