An‐Yuan Guo

OmniTCR: a foundation model unifying T cell receptor recognition prediction and conditional sequence generation

OmniTCR is a foundation model that predicts TCR recognition and generates TCR sequences, outperforming existing methods on multiple tasks.

Integrated analysis and annotation for T-cell receptor sequences using TCRosetta

TCRosetta is a web server for TCR repertoire analysis that integrates sequence clustering, motif analysis, and disease annotation, simplifying TCR data analysis for researchers.

CCLA: an accurate method and web server for cancer cell line authentication using gene expression profiles

CCLA authenticates cancer cell lines using gene expression profiles with high accuracy and speed, offering a web server for public use.

An ultra-sensitive T-cell receptor detection method for TCR-Seq and RNA-Seq data

CATT is a tool for ultra-sensitive TCR repertoire analysis using TCR-Seq, RNA-Seq, and single-cell data, showing improved recall and precision over existing methods.

hTFtarget: a comprehensive database for regulations of human transcription factors and their targets

The paper introduces hTFtarget, a database that integrates ChIP-Seq data and epigenetic information to predict and explore human transcription factor-target regulatory relationships.

ImmuCellAI: a unique method for comprehensive T-cell subsets abundance prediction and its application in cancer immunotherapy

ImmuCellAI predicts T-cell subsets and immune cell abundance from gene expression data, showing high accuracy in cancer immunotherapy applications.

Systematical analysis reveals the novel function of Cyp2c29 in liver injury

The paper identifies Cyp2c29 as a key gene downregulated in liver injury, showing its protective role against inflammation and potential as a biomarker for HCC prevention.