Author

Si‐Yi Chen

Huazhong University of Science and TechnologyORCID 0000-0001-8076-0576Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Assay:proteomics· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

An‐Yuan GuoiD· 2 shared Chunjie LiuiD· 1 shared Liming ChengiD· 1 shared Qiong ZhangiD· 1 shared Tao YueiD· 1 shared Wen‐Kang SheniD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 9 mutual co-author links

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2 shared papersBioinformatics

An‐Yuan GuoORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintFeb 20, 2023

Integrated analysis and annotation for T-cell receptor sequences using TCRosetta

Tao Yue, Si‐Yi Chen, Wen‐Kang Shen…·An‐Yuan Guo

TCRosetta is a web server for TCR repertoire analysis that integrates sequence clustering, motif analysis, and disease annotation, simplifying TCR data analysis for researchers.

DOI 10.1101/2023.02.20.529199

humanproteomics

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BioinformaticsBioinformaticsPeer-reviewedMay 6, 2020

An ultra-sensitive T-cell receptor detection method for TCR-Seq and RNA-Seq data

Si‐Yi Chen, Chunjie Liu, Qiong Zhang, An‐Yuan Guo

CATT is a tool for ultra-sensitive TCR repertoire analysis using TCR-Seq, RNA-Seq, and single-cell data, showing improved recall and precision over existing methods.

24 citations

humanscRNA-seq

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