Evaluating assembly and variant calling software for strain-resolved analysis of large DNA-viruses
Zhi-Luo Deng, Akshay Dhingra, Adrian Fritz, Jasper Götting, Philipp C. Münch, Lars Steinbrück, Thomas Friedrich Schulz, Tina Ganzenmueller, Alice Carolyn McHardy
This study benchmarks assemblers and variant callers for strain-resolved analysis of large DNA viruses, identifying best practices and challenges in handling low-divergent viral populations.
Briefings in Bioinformatics · May 24, 2020Peer-reviewedBioinformatics