Author

Nan Zhao

Southeast UniversityORCID 0000-0002-5218-1048Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Nan Zhao1 paper · Memorial Sloan Kettering Cancer Center

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Assay:long-read sequencing· 1 Assay:metabolomics· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Daniel JacobsoniD· 2 shared Gerald A. TuskaniD· 2 shared Jeremy SchmutziD· 2 shared Madhavi Z. MartiniD· 2 shared Priya RanjaniD· 2 shared Timothy James TschaplinskiiD· 2 shared Wellington MucheroiD· 2 shared Anna FurchesiD· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

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2 shared papersGenomics

Daniel JacobsonORCID

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2 papers

Recent·Most cited

Telomere-to-telomere assemblies reveal complex adaptive variation of 3-ketoacyl-CoA-synthases in Populus trichocarpa likely driven by helitrons

David Kainer, Stanton Martin, Daniel Hopp, Sophie Mosher, Timothy James Tschaplinski, P. Doug Hyatt, Madhavi Z. Martin, Jared M. LeBoldus, Kelsey L. Søndreli, Posy E. Busby, Mengjun Shu, Kerrie Barry, Jeremy Schmutz, Anna Furches, Nan Zhao, , Michael R. Garvin

The paper uses long-read sequencing to analyze telomere-to-telomere assemblies in Populus trichocarpa, revealing complex KCS gene variation and its association with helitron transposons.

bioRxiv · Jul 10, 2025 · PreprintGenomics

Pleiotropic and Epistatic Network-Based Discovery: Integrated Networks for Target Gene Discovery

Deborah A. Weighill, Piet C. Jones, Manesh B. Shah, Priya Ranjan, Wellington Muchero, Jeremy Schmutz, Avinash Sreedasyam, David Macaya‐Sanz, Robert W. Sykes, Nan Zhao, Madhavi Z. Martin, Stephen Paul DiFazio, Timothy James Tschaplinski, Gerald A. Tuskan, Daniel Jacobson

The paper integrates genomic, metabolomic, and network data to identify target genes involved in lignin biosynthesis/degradation in Populus trichocarpa.

Frontiers in Energy Research · May 11, 2018Peer-reviewedBioinformatics