Author

Denis Kutnjak

National Institute of BiologyORCID 0000-0002-5327-0587Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:database / resource· 2 Assay:metagenomics· 2 Assay:bulk RNA-seq· 1 Approach:machine learning (classical)· 1 Research Focus:phylogenetics / evolution· 1 Organism:plant (other)· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Katarina BačnikiD· 2 shared Ana VučurovićiD· 1 shared Ion Gutiérrez‐AguirreiD· 1 shared Lana VogrineciD· 1 shared Luka KranjciD· 1 shared Maja RavnikariD· 1 shared Mark Paul Selda RivareziD· 1 shared Nataša MehleiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Katarina BačnikORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 23, 2026

✦ In-depth digest

Data mining of global sequence datasets markedly expands known diversity within the Tobamovirus genus

Neža Pajek Arambašič, Katarina Bačnik, Luka Kranjc…·Denis Kutnjak

Serratus-guided Snakemake mining, expert curation, clustering and phylogenetic placement identify at least 32 putative novel tobamoviruses in public short-read data, mostly Amazon River metatranscriptomes; a random-forest classifier partly automates curation.

1 citation

virusplant (other)

𝕏 PostBluesky

Molecular BiologyWater ResearchPeer-reviewedOct 9, 2023

Virome analysis of irrigation water sources provides extensive insights into the diversity and distribution of plant viruses in agroecosystems

Olivera Maksimović, Katarina Bačnik, Mark Paul Selda Rivarez…·Denis Kutnjak

The paper analyzes irrigation water viromes to understand plant virus diversity and distribution, finding novel viruses and linking water viromes to plant health.

10 citations

metagenomicsstatistical model

𝕏 PostBluesky