Differential T cell receptor clonotype abundance analysis with similarity-based counts weighting
Franka Buytenhuijs, Thomas Chris Smits, Ankur Ankan, Johannes C. Textor
The paper introduces a pre-processing method for TCR-seq data using sequence similarity-based weighting to improve differential abundance analysis and reduce false positives.
bioRxiv · Mar 28, 2025 · PreprintBioinformatics