Author

Alessandro Marin

University of OsloORCID 0000-0002-5524-3451Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:multiome· 1

Frequent Co-Authors

John F QuackenbushiD· 2 shared Kimberly GlassiD· 2 shared Marieke L. KuijjeriD· 2 shared Abhijeet Sonanwane· 1 shared Alex Song· 1 shared Camila M. Lopes‐RamosiD· 1 shared Cho-Yi CheniD· 1 shared Daniel C. MorganiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

John F QuackenbushORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintMay 30, 2022

The Network Zoo: a multilingual package for the inference and analysis of biological networks

Marouen Ben Guebila, Tian Wang, Camila M. Lopes‐Ramos…·John F Quackenbush

The paper introduces netZoo, an open-source software suite for analyzing biological networks, demonstrating its use on cancer cell line data to identify drug resistance and cancer development factors.

1 citation

multiomestatistical model

𝕏 PostBluesky

Systems BiologyBioinformaticsPeer-reviewedJun 10, 2020

PUMA: PANDA Using MicroRNA Associations

Marieke L. Kuijjer, Maud Fagny, Alessandro Marin…·Kimberly Glass

PUMA integrates miRNA target predictions with gene expression data to identify tissue-specific miRNA regulatory interactions and their disease relevance.

32 citations

humanbulk RNA-seq

𝕏 PostBluesky