Author

Patricio López-Sánchez

National Institute of Genomic MedicineORCID 0000-0002-5755-814XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Plant Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Organism:human· 1 Assay:imaging· 1

Frequent Co-Authors

Alejandra BarriosiD· 1 shared Alejandra Rougon‐CardosoiD· 1 shared Aman Y. HusbandsiD· 1 shared Annabel Romero-HernandeziD· 1 shared Asia T. HightoweriD· 1 shared aura Montemayor-Lara· 1 shared Benedikt DolgikhiD· 1 shared Beronda L. MontgomeryiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperPlant Biology

Alejandra BarriosORCID

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2 papers

Recent·Most cited

The Euler Characteristic Transform Enables Classification of Complex Plant Shapes and Prediction of Leaf Venation from Blade Geometry

Yemeen Ayub, Sarah Scullen, Sarah Percival, William N. Weaver, Nischal Karki, Wahiba Yahiaoui, Karina Astudillo-Pavon, Alejandra Barrios, Jill C. Check, Joel Colchado-López, Benedikt Dolgikh, Deborah V. Espinosa-Martínez, Qiuyi Fu, Kevin Manuel Galván Lara, Jorge Noé García-Chávez, , Daniel H. Chitwood

This paper introduces the Euler Characteristic Transform (ECT) for classifying plant shapes and predicting leaf venation from blade geometry using deep learning.

bioRxiv · Apr 16, 2026 · PreprintPlant Biology

Patient-specific gene networks reveal novel subtypes and predictive biomarkers in lung cancer

Patricio López-Sánchez, Federico Ávila‐Moreno, E. Hernández-Lemus, Marieke L. Kuijjer, Jesús Espinal Enríquez

The paper reconstructs patient-specific gene co-expression networks in lung adenocarcinoma to identify subtypes and survival predictive biomarkers.

bioRxiv · Aug 6, 2024 · PreprintSystems Biology