Author

Joseph Shea

New York State Department of HealthORCID 0000-0002-5939-4193Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Donna J. Kohlerschmidt· 1 shared Kimberlee Arruda MusseriD· 1 shared Kruthikaben Patel· 1 shared Michelle C. DickinsoniD· 1 shared Pascal LapierreiD· 1 shared Tanya A. HalseiD· 1 shared Vincent E. EscuyeriD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperMicrobiology

Donna J. Kohlerschmidt

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1 paper

Recent·Most cited

MicrobiologyJournal of Clinical MicrobiologyPeer-reviewedMar 18, 2026

Predicting Isoniazid Resistance in Mycobacterium tuberculosis Complex in New York State using Whole Genome Sequencing

Kruthikaben Patel, Joseph Shea, Pascal Lapierre…·Kimberlee Arruda Musser

This study uses whole genome sequencing to predict isoniazid resistance in Mycobacterium tuberculosis complex strains, showing high accuracy and demonstrating its utility in clinical settings.

DOI 10.1128/jcm.01609-25

humanwhole-genome sequencing

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