Author

Valérie Bouchez

Institut PasteurORCID 0000-0002-5947-6383Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Organism:human· 2 Research Focus:phylogenetics / evolution· 2 Assay:long-read sequencing· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Sylvain BrisseiD· 3 shared Annie LandieriD· 2 shared Carla RodriguesiD· 2 shared Juan José González‐LópeziD· 2 shared Julie ToubianaiD· 2 shared Nathalie ArmatysiD· 2 shared Sophie GuillotiD· 2 shared Adele HabingtoniD· 1 shared

Activity by Year

2021-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

Sylvain BrisseORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

MicrobiologyMicrobial GenomicsPeer-reviewedNov 14, 2025

No innocent bystanders: pertussis vaccination epitomizes evolutionary parallelisms between Bordetella parapertussis and B. pertussis

Valérie Bouchez, ALBERT J. MORENO, Alba Mir-Cros…·Sylvain Brisse

This paper shows that Bordetella parapertussis evolved similarly to Bordetella pertussis after pertussis vaccination, including loss of pertactin and changes in regulatory regions.

1 citation

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsGenome ResearchPeer-reviewedAug 1, 2025

Accurate genotyping of three major respiratory bacterial pathogens with ONT R10.4.1 long-read sequencing

Nora Zidane, Carla Rodrigues, Valérie Bouchez…·Chiara Crestani

This study evaluates ONT R10.4.1 long-read sequencing for accurate genotyping of three respiratory pathogens, showing error rates below 1% for cgMLST.

7 citations

humanlong-read sequencing

𝕏 PostBluesky

GeneticsbioRxivPreprintNov 1, 2021

Spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis

Noémie Lefrancq, Valérie Bouchez, Nadia J. Fernandes…·Sylvain Brisse

The paper analyzes B. pertussis genotype dynamics post-vaccine policy changes, showing fitness shifts and regional diversity patterns.

2 citations

statistical modelphylogenetics / evolution

𝕏 PostBluesky