Author

Andrew E. Nixon

Boehringer Ingelheim (United States)ORCID 0000-0002-6090-0583Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Research Focus:protein structure prediction· 1 Research Focus:sequence-to-function modeling· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

James HeuschkeliD· 1 shared Laura J. KingsleyiD· 1 shared Noah B. PefauriD· 1 shared Steven Cramer· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

James HeuschkelORCID

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1 paper

Recent·Most cited

Advancing Codon Language Modeling with Synonymous Codon Constrained Masking

James Heuschkel, Laura J. Kingsley, Noah B. Pefaur, Andrew E. Nixon, Steven Cramer

This paper introduces SynCodonLM, a codon language model that enforces synonymous codon constraints, improving performance on DNA-level biology benchmarks.

Nucleic Acids Research · Feb 14, 2026Peer-reviewedBioinformatics