Author

Carsten Hain

European Molecular Biology LaboratoryORCID 0000-0002-6206-9906Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:experimental assay· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1

Frequent Co-Authors

Jan O. KorbeliD· 2 shared Tobias RauschiD· 2 shared Arda SöyleviD· 1 shared Bernardo Rodríguez–MartíniD· 1 shared Christian GilisseniD· 1 shared Dagmar WieczorekiD· 1 shared Ewan BirneyiD· 1 shared Francy J. Pérez-LlanosiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Jan O. KorbelORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintJun 23, 2026

HOROSCOPE: Decoding human centromere architecture from short reads using k-mer signatures

Carsten Hain, Tobias Rausch, Jan O. Korbel

HOROSCOPE uses k-mer signatures to infer centromere architecture and length from short-read data, revealing continental structure and cancer-related rearrangements.

DOI 10.64898/2026.06.10.731283

humanwhole-genome sequencing

GenomicsNaturePeer-reviewedJul 23, 2025

Long-read sequencing and structural variant characterization in 1,019 samples from the 1000 Genomes Project

Siegfried Schloissnig, Samarendra Pani, Jana Ebler…·Jan O. Korbel

The paper uses long-read sequencing to characterize structural variants in 1,019 samples from the 1000 Genomes Project, identifying 167,291 sequence-resolved SVs and highlighting their genomic and functional implications.

121 citationstop 1%

humanwhole-genome sequencing

GenomicsbioRxivPreprintJul 3, 2023

Long-read Sequencing Shows Complex Structural Variants in Tumor-stage Mycosis Fungoides

Carsten Hain, Rudolf Stadler, Jörn Kalinowski

This study uses long-read sequencing to analyze structural variants in mycosis fungoides tumors, revealing complex SVs and chromothripsis events.

DOI 10.1101/2023.07.03.547529

humanlong-read sequencing