Author

Daisuke Kyogoku

Museum of Nature and Human Activities HyogoORCID 0000-0002-6214-8241Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:plant (other)· 1

Frequent Co-Authors

Atsushi J. NaganoiD· 2 shared Hiroyuki WatanabeiD· 1 shared Kei Hirose· 1 shared Naoya Mori· 1 shared Satoshi Kondo· 1 shared Suguru E. TanakaiD· 1 shared Takanari TanabataiD· 1 shared Yoichi HashidaiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 21 mutual co-author links

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2 shared papersPlant Biology

Atsushi J. NaganoORCID

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2 papers

Recent·Most cited

Plant BiologyGenome biologyPeer-reviewedJul 28, 2025

Field-crop transcriptome models are enhanced by measurements in systematically controlled environments

Yoichi Hashida, Daisuke Kyogoku, Suguru E. Tanaka…·Atsushi J. Nagano

The paper shows that transcriptome dynamics in rice are mainly regulated by irradiance, using models trained on controlled environment data.

2 citations

plant (other)bulk RNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintSep 11, 2020

Effects of underlying gene-regulation network structure on prediction accuracy in high-dimensional regression

Yuichi Okinaga, Daisuke Kyogoku, Satoshi Kondo…·Kei Hirose

This study investigates how gene-regulation network structure affects prediction accuracy in high-dimensional regression using Monte Carlo simulations.

DOI 10.1101/2020.09.11.293456

bulk RNA-seqstatistical model

𝕏 PostBluesky