Author

Lukáš Pravda

European Bioinformatics InstituteORCID 0000-0002-6435-4719Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:protein structure· 2 Approach:statistical model· 2 Research Focus:database / resource· 1

Frequent Co-Authors

Alma Carolina Sánchez-RochaiD· 1 shared Ibrahim Roshan KunnakkattuiD· 1 shared Klára HlouchováiD· 1 shared Marián NovotnýiD· 1 shared Mihály VáradiiD· 1 shared Mikhail MakaroviD· 1 shared Nurul NadziriniD· 1 shared Oliver S. SmartiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alma Carolina Sánchez-RochaORCID

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2 papers

Recent·Most cited

BioinformaticseLifePeer-reviewedDec 4, 2025

Coenzyme-Protein Interactions since Early Life

Alma Carolina Sánchez-Rocha, Mikhail Makarov, Lukáš Pravda…·Klára Hlouchová

This study examines protein-coenzyme interactions in the Protein Data Bank to assess the plausibility of early peptide-cofactor collaborations before the Central Dogma.

4 citations

protein structurestatistical model

BioinformaticsJournal of CheminformaticsPeer-reviewedDec 2, 2023

PDBe CCDUtils: an RDKit-based toolkit for handling and analysing small molecules in the Protein Data Bank

Ibrahim Roshan Kunnakkattu, Preeti Choudhary, Lukáš Pravda…·Sameer S Velankar

PDBe CCDUtils processes and analyzes small molecules from the PDB using RDKit, offering tools for property computation and database cross-references.

23 citations

protein structurestatistical model