Nazim Bouatta

The paper trains a new version of AlphaFold2, OpenFold, and evaluates its generalization ability and learning mechanisms.

The paper introduces RNA3DB, a dataset of structured RNAs designed for training and benchmarking deep learning models, with non-redundant sequence and structure splits to improve generalization.

This paper introduces RGN2, a deep learning model that predicts protein structure from single sequences without MSAs, outperforming AlphaFold2 and RoseTTAFold on orphan proteins and achieving faster computation.