Author

Li Li

The University of Texas MD Anderson Cancer CenterORCID 0000-0002-6680-5886Unclaimed ORCID profile · follow to get notified of new preprints

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Li Li18 papers · Shanghai Jiao Tong University

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Assay:CITE-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Ken CheniD· 2 shared Fang WangiD· 1 shared Jinzhuang DouiD· 1 shared Katayoun RezvaniiD· 1 shared Katy Rezvani· 1 shared May DaheriD· 1 shared Merve DedeiD· 1 shared Muharrem MüftüoğluiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBioinformatics

Ken ChenORCID

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2 papers

Recent·Most cited

Characterizing metabolism from bulk and single-cell RNA-seq data using METAFlux

Yuefan Huang, Vakul Mohanty, Merve Dede, May Daher, Li Li, Katayoun Rezvani, Ken Chen

The paper develops METAFlux to infer metabolic fluxes from bulk and single-cell RNA-seq data, showing improved accuracy over existing methods in cancer TME analysis.

bioRxiv · May 18, 2022 · PreprintBioinformatics

Ab initio Spillover Compensation in CyTOF Data

Qi Miao, Fang Wang, Jinzhuang Dou, Ramiz Iqbal, Muharrem Müftüoğlu, Rafet Başar, Li Li, Katy Rezvani, Ken Chen

This paper introduces CytoSpill, a statistical method to correct spillover effects in CyTOF data without single-stained controls, improving clustering accuracy and enabling novel subpopulation discovery.

Cytometry Part A · Dec 20, 2020Peer-reviewedBioinformatics