Author

Ernesto Pérez‐Rueda

Universidad Nacional Autónoma de MéxicoORCID 0000-0002-6879-0673Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:gene regulatory network inference· 1 Research Focus:phylogenetics / evolution· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Abraham Zapata-Araya· 1 shared Alberto Santos-ZavaletaiD· 1 shared Alejandra GiavenoiD· 1 shared Ana Moya-BeltrániD· 1 shared Beatriz Dı́eziD· 1 shared Camila Rojas-VillalobosiD· 1 shared Cesar Valenzuela· 1 shared David A. Velázquez-RamíreziD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Abraham Zapata-Araya

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Plasmidome-defensome interactions drive adaptation of 'Fervidacidithiobacillus caldus' in natural and industrial extreme acidic environments

Sebastián Pacheco-Acosta, Gustavo Castro-Toro, Camila Rojas-Villalobos, Cesar Valenzuela, Juan José Haristoy, Abraham Zapata-Araya, Ana Moya-Beltrán, Pedro Sepúlveda-Rebolledo, Ernesto Pérez‐Rueda, Ricardo J. Ulloa, Alejandra Giaveno, Francisco Issotta, Beatriz Dı́ez, Simón Beard, Raquel Quatrini

The paper analyzes plasmid diversity and defense systems in Fervidacidithiobacillus caldus across natural and industrial environments, revealing host-plasmid interactions that drive adaptation.

bioRxiv · Apr 2, 2025 · PreprintGenomics

Tracing the phylogenetic history of the Crl regulon through the Bacteria and Archaea genomes.

Alberto Santos-Zavaleta, Ernesto Pérez‐Rueda, Mishael Sánchez-Pérez, David A. Velázquez-Ramírez, Julio Collado‐Vides

The paper identifies a comprehensive dataset of Crl-regulated genes in E. coli and traces the evolutionary history of the Crl regulon across archaeal and bacterial taxa.

BMC Genomics · Apr 16, 2019Peer-reviewedGenomics