scGAE: topology-preserving dimensionality reduction for single-cell RNA-seq data using graph autoencoder
Zixiang Luo, Chenyu Xu, Zhen Zhang, Wenfei Jin
scGAE is a dimensionality reduction method for scRNA-seq data that preserves topological structure, outperforming existing methods in trajectory reconstruction and clustering.
Scientific Reports · Oct 8, 2021Peer-reviewedBioinformatics